Index of /packages/3.21/bioc/src/contrib
Name Last modified Size Description
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ABSSeq_1.62.0.tar.gz 2025-04-22 18:37 1.1M
ABarray_1.76.0.tar.gz 2025-04-22 18:37 685K
ACE_1.26.0.tar.gz 2025-04-22 18:37 2.5M
ACME_2.64.0.tar.gz 2025-04-22 18:37 9.9M
ADAM_1.24.0.tar.gz 2025-04-22 18:37 321K
ADAMgui_1.24.0.tar.gz 2025-04-22 18:37 1.7M
ADAPT_1.2.0.tar.gz 2025-04-22 18:37 385K
ADImpute_1.18.0.tar.gz 2025-04-22 18:37 2.1M
ADaCGH2_2.48.0.tar.gz 2025-04-22 18:37 1.2M
AGDEX_1.56.0.tar.gz 2025-04-22 18:37 487K
AHMassBank_1.8.0.tar.gz 2025-04-22 18:37 294K
AIMS_1.40.0.tar.gz 2025-04-22 18:37 485K
ALDEx2_1.40.0.tar.gz 2025-04-22 18:37 3.0M
AMARETTO_1.24.0.tar.gz 2025-04-22 18:37 3.2M
AMOUNTAIN_1.34.0.tar.gz 2025-04-22 18:37 1.7M
ANCOMBC_2.10.0.tar.gz 2025-04-22 18:37 1.2M
ANF_1.30.0.tar.gz 2025-04-22 18:37 683K
APAlyzer_1.22.0.tar.gz 2025-04-22 18:37 3.9M
APL_1.12.0.tar.gz 2025-04-22 18:37 2.4M
ARRmNormalization_1.48.0.tar.gz 2025-04-22 18:37 1.1M
ASAFE_1.34.0.tar.gz 2025-04-22 18:37 426K
ASEB_1.52.0.tar.gz 2025-04-22 18:37 602K
ASGSCA_1.42.0.tar.gz 2025-04-22 18:37 1.3M
ASICS_2.24.0.tar.gz 2025-04-22 18:37 3.6M
ASSET_2.26.0.tar.gz 2025-04-22 18:37 322K
ASSIGN_1.44.0.tar.gz 2025-04-22 18:37 1.6M
ASURAT_1.12.0.tar.gz 2025-04-22 18:37 1.6M
ASpli_2.18.0.tar.gz 2025-04-22 18:37 4.8M
ATACseqQC_1.32.0.tar.gz 2025-04-22 18:37 15M
ATACseqTFEA_1.10.0.tar.gz 2025-04-22 18:37 4.5M
AUCell_1.30.0.tar.gz 2025-04-22 18:37 1.9M
AWFisher_1.22.0.tar.gz 2025-04-22 18:37 1.4M
AffiXcan_1.26.0.tar.gz 2025-04-22 18:37 2.4M
AffyRNADegradation_1.54.0.tar.gz 2025-04-22 18:37 365K
AgiMicroRna_2.58.0.tar.gz 2025-04-22 18:37 3.1M
AllelicImbalance_1.46.0.tar.gz 2025-04-22 18:37 774K
AlphaBeta_1.22.0.tar.gz 2025-04-22 18:37 2.5M
AlphaMissenseR_1.4.0.tar.gz 2025-04-22 18:37 2.7M
AlpsNMR_4.10.0.tar.gz 2025-04-22 18:37 3.7M
AnVILAz_1.2.0.tar.gz 2025-04-22 18:37 826K
AnVILBase_1.2.0.tar.gz 2025-04-22 18:37 228K
AnVILBilling_1.18.0.tar.gz 2025-04-22 18:37 1.0M
AnVILGCP_1.2.0.tar.gz 2025-04-22 18:37 417K
AnVILPublish_1.18.0.tar.gz 2025-04-22 18:37 236K
AnVILWorkflow_1.8.0.tar.gz 2025-04-22 18:37 1.1M
AnVIL_1.20.0.tar.gz 2025-04-22 18:37 1.2M
Anaquin_2.32.0.tar.gz 2025-04-22 18:37 452K
AneuFinder_1.35.0.tar.gz 2025-04-22 18:37 2.0M
AnnotationDbi_1.70.0.tar.gz 2025-04-22 18:37 4.2M
AnnotationFilter_1.32.0.tar.gz 2025-04-22 18:37 317K
AnnotationForge_1.50.0.tar.gz 2025-04-22 18:37 3.8M
AnnotationHubData_1.38.0.tar.gz 2025-04-22 18:37 400K
AnnotationHub_3.16.0.tar.gz 2025-04-22 18:37 1.0M
ArrayExpress_1.67.1.tar.gz 2025-04-22 18:37 137K
AssessORF_1.26.0.tar.gz 2025-04-22 18:37 4.7M
BADER_1.46.0.tar.gz 2025-04-22 18:37 238K
BAGS_2.48.0.tar.gz 2025-04-22 18:37 275K
BANDITS_1.24.0.tar.gz 2025-04-22 18:37 1.3M
BASiCS_2.20.0.tar.gz 2025-04-22 18:37 3.2M
BASiCStan_1.10.0.tar.gz 2025-04-22 18:37 64K
BBCAnalyzer_1.38.0.tar.gz 2025-04-22 18:37 2.2M
BCRANK_1.70.0.tar.gz 2025-04-22 18:37 2.9M
BEAT_1.46.0.tar.gz 2025-04-22 18:37 3.3M
BERT_1.4.0.tar.gz 2025-04-22 18:37 258K
BEclear_2.24.0.tar.gz 2025-04-22 18:37 722K
BG2_1.8.0.tar.gz 2025-04-22 18:37 1.1M
BLMA_1.32.0.tar.gz 2025-04-22 18:37 2.8M
BOBaFIT_1.12.0.tar.gz 2025-04-22 18:37 2.5M
BPRMeth_1.34.0.tar.gz 2025-04-22 18:37 3.2M
BRAIN_1.54.0.tar.gz 2025-04-22 18:37 2.0M
BREW3R.r_1.4.0.tar.gz 2025-04-22 18:37 1.9M
BSgenomeForge_1.8.0.tar.gz 2025-04-22 18:37 694K
BSgenome_1.76.0.tar.gz 2025-04-22 18:37 5.6M
BUMHMM_1.32.0.tar.gz 2025-04-22 18:37 712K
BUS_1.64.0.tar.gz 2025-04-22 18:37 2.8M
BUScorrect_1.26.0.tar.gz 2025-04-22 18:37 3.5M
BUSpaRse_1.22.0.tar.gz 2025-04-22 18:37 627K
BUSseq_1.14.0.tar.gz 2025-04-22 18:37 1.0M
BaalChIP_1.34.0.tar.gz 2025-04-22 18:37 45M
BadRegionFinder_1.36.0.tar.gz 2025-04-22 18:37 833K
Banksy_1.4.0.tar.gz 2025-04-22 18:37 5.0M
BaseSpaceR_1.52.0.tar.gz 2025-04-22 18:37 580K
Basic4Cseq_1.44.0.tar.gz 2025-04-22 18:37 385K
BasicSTARRseq_1.36.0.tar.gz 2025-04-22 18:37 552K
BatchQC_2.4.0.tar.gz 2025-04-22 18:37 3.6M
BatchSVG_1.0.0.tar.gz 2025-04-22 18:37 1.5M
BayesKnockdown_1.34.0.tar.gz 2025-04-22 18:37 212K
BayesSpace_1.17.0.tar.gz 2025-04-22 18:37 1.2M
BeadDataPackR_1.60.0.tar.gz 2025-04-22 18:37 235K
BgeeCall_1.24.0.tar.gz 2025-04-22 18:37 5.7M
BgeeDB_2.34.0.tar.gz 2025-04-22 18:37 107K
BiFET_1.28.0.tar.gz 2025-04-22 18:37 644K
BiGGR_1.44.0.tar.gz 2025-04-22 18:37 4.3M
BiRewire_3.40.0.tar.gz 2025-04-22 18:37 727K
BiSeq_1.48.0.tar.gz 2025-04-22 18:37 915K
BicARE_1.66.0.tar.gz 2025-04-22 18:37 460K
BindingSiteFinder_2.6.0.tar.gz 2025-04-22 18:37 2.8M
BioCartaImage_1.6.0.tar.gz 2025-04-22 18:37 3.6M
BioCor_1.32.0.tar.gz 2025-04-22 18:37 1.7M
BioGA_1.2.0.tar.gz 2025-04-22 18:37 330K
BioMVCClass_1.76.0.tar.gz 2025-04-22 18:37 131K
BioNAR_1.10.0.tar.gz 2025-04-22 18:37 3.5M
BioNERO_1.16.0.tar.gz 2025-04-22 18:37 4.8M
BioNet_1.68.0.tar.gz 2025-04-22 18:37 1.8M
BioQC_1.36.0.tar.gz 2025-04-22 18:37 4.3M
BioTIP_1.22.0.tar.gz 2025-04-22 18:37 41M
Biobase_2.68.0.tar.gz 2025-04-22 18:37 1.9M
BiocBaseUtils_1.10.0.tar.gz 2025-04-22 18:37 226K
BiocBook_1.6.0.tar.gz 2025-04-22 18:37 903K
BiocCheck_1.44.0.tar.gz 2025-04-22 18:37 309K
BiocFHIR_1.10.0.tar.gz 2025-04-22 18:37 4.3M
BiocFileCache_2.16.0.tar.gz 2025-04-22 18:37 722K
BiocGenerics_0.54.0.tar.gz 2025-04-22 18:37 55K
BiocHail_1.7.1.tar.gz 2025-04-22 18:37 2.6M
BiocHubsShiny_1.8.0.tar.gz 2025-04-22 18:37 1.6M
BiocIO_1.18.0.tar.gz 2025-04-22 18:37 226K
BiocNeighbors_2.2.0.tar.gz 2025-04-22 18:37 329K
BiocParallel_1.42.0.tar.gz 2025-04-22 18:37 1.0M
BiocPkgTools_1.26.0.tar.gz 2025-04-22 18:37 1.5M
BiocSet_1.22.0.tar.gz 2025-04-22 18:37 359K
BiocSingular_1.24.0.tar.gz 2025-04-22 18:37 602K
BiocSklearn_1.30.0.tar.gz 2025-04-22 18:37 33M
BiocStyle_2.36.0.tar.gz 2025-04-22 18:37 884K
BiocVersion_3.21.1.tar.gz 2025-04-22 18:37 1.0K
BiocWorkflowTools_1.34.0.tar.gz 2025-04-22 18:37 1.0M
Biostrings_2.76.0.tar.gz 2025-04-22 18:37 12M
BloodGen3Module_1.16.0.tar.gz 2025-04-22 18:37 179K
BreastSubtypeR_1.0.0.tar.gz 2025-04-22 18:37 2.7M
BridgeDbR_2.18.0.tar.gz 2025-04-22 18:37 4.6M
BrowserViz_2.30.0.tar.gz 2025-04-22 18:37 241K
BubbleTree_2.38.0.tar.gz 2025-04-22 18:37 28M
BufferedMatrixMethods_1.72.0.tar.gz 2025-04-22 18:37 11K
BufferedMatrix_1.72.0.tar.gz 2025-04-22 18:37 630K
BulkSignalR_1.0.0.tar.gz 2025-04-22 18:37 3.0M
BumpyMatrix_1.16.0.tar.gz 2025-04-22 18:37 318K
CAEN_1.16.0.tar.gz 2025-04-22 18:37 1.0M
CAFE_1.44.0.tar.gz 2025-04-22 18:37 4.6M
CAGEfightR_1.28.0.tar.gz 2025-04-22 18:37 1.7M
CAGEr_2.14.0.tar.gz 2025-04-22 18:37 1.9M
CAMERA_1.64.0.tar.gz 2025-04-22 18:37 2.4M
CARDspa_1.0.0.tar.gz 2025-04-22 18:37 3.8M
CARNIVAL_2.18.0.tar.gz 2025-04-22 18:37 2.0M
CATALYST_1.32.0.tar.gz 2025-04-22 18:37 11M
CBNplot_1.8.0.tar.gz 2025-04-22 18:37 1.0M
CCAFE_1.0.0.tar.gz 2025-04-22 18:37 5.7M
CCPROMISE_1.34.0.tar.gz 2025-04-22 18:37 1.0M
CCPlotR_1.6.0.tar.gz 2025-04-22 18:37 4.6M
CDI_1.6.0.tar.gz 2025-04-22 18:37 2.0M
CEMiTool_1.32.0.tar.gz 2025-04-22 18:37 5.5M
CFAssay_1.42.0.tar.gz 2025-04-22 18:37 323K
CGEN_3.44.0.tar.gz 2025-04-22 18:37 1.0M
CGHbase_1.68.0.tar.gz 2025-04-22 18:37 848K
CGHcall_2.70.0.tar.gz 2025-04-22 18:37 451K
CGHnormaliter_1.62.0.tar.gz 2025-04-22 18:37 1.2M
CGHregions_1.66.0.tar.gz 2025-04-22 18:37 213K
CHETAH_1.24.0.tar.gz 2025-04-22 18:37 3.5M
CHRONOS_1.36.0.tar.gz 2025-04-22 18:37 1.1M
CIMICE_1.16.0.tar.gz 2025-04-22 18:37 1.6M
CINdex_1.36.0.tar.gz 2025-04-22 18:37 13M
CMA_1.66.0.tar.gz 2025-04-22 18:37 1.2M
CNAnorm_1.54.0.tar.gz 2025-04-22 18:37 1.5M
CNEr_1.43.0.tar.gz 2025-04-22 18:37 9.6M
CNORdt_1.50.0.tar.gz 2025-04-22 18:37 319K
CNORfeeder_1.48.0.tar.gz 2025-04-22 18:37 3.4M
CNORfuzzy_1.50.0.tar.gz 2025-04-22 18:37 922K
CNORode_1.50.0.tar.gz 2025-04-22 18:37 486K
CNTools_1.64.0.tar.gz 2025-04-22 18:37 960K
CNVMetrics_1.12.0.tar.gz 2025-04-22 18:37 4.7M
CNVPanelizer_1.40.0.tar.gz 2025-04-22 18:37 363K
CNVRanger_1.24.0.tar.gz 2025-04-22 18:37 2.0M
CNVfilteR_1.21.0.tar.gz 2025-04-22 18:37 1.0M
CNViz_1.16.0.tar.gz 2025-04-22 18:37 116K
CNVrd2_1.46.0.tar.gz 2025-04-22 18:37 2.8M
COCOA_2.22.0.tar.gz 2025-04-22 18:37 3.8M
CODEX_1.40.0.tar.gz 2025-04-22 18:37 915K
COMPASS_1.46.0.tar.gz 2025-04-22 18:37 1.3M
CONFESS_1.36.0.tar.gz 2025-04-22 18:37 3.6M
CONSTANd_1.16.0.tar.gz 2025-04-22 18:37 1.7M
COSNet_1.42.0.tar.gz 2025-04-22 18:37 520K
COTAN_2.8.0.tar.gz 2025-04-22 18:37 4.1M
CPSM_1.0.0.tar.gz 2025-04-22 18:37 4.2M
CRISPRball_1.4.0.tar.gz 2025-04-22 18:37 2.6M
CRISPRseek_1.48.0.tar.gz 2025-04-22 18:37 12M
CRImage_1.56.0.tar.gz 2025-04-22 18:37 7.7M
CSAR_1.60.0.tar.gz 2025-04-22 18:37 234K
CSSQ_1.20.0.tar.gz 2025-04-22 18:37 866K
CTDquerier_2.16.0.tar.gz 2025-04-22 18:37 2.8M
CTSV_1.10.0.tar.gz 2025-04-22 18:37 303K
CTdata_1.8.0.tar.gz 2025-04-22 18:37 7.0M
CTexploreR_1.4.0.tar.gz 2025-04-22 18:37 7.3M
CaDrA_1.6.0.tar.gz 2025-04-22 18:37 2.4M
CaMutQC_1.4.0.tar.gz 2025-04-22 18:37 4.8M
CardinalIO_1.6.0.tar.gz 2025-04-22 18:37 1.0M
Cardinal_3.10.0.tar.gz 2025-04-22 18:37 5.2M
Category_2.74.0.tar.gz 2025-04-22 18:37 874K
CatsCradle_1.2.0.tar.gz 2025-04-22 18:37 6.1M
CausalR_1.40.0.tar.gz 2025-04-22 18:37 573K
CeTF_1.20.0.tar.gz 2025-04-22 18:37 3.8M
CellBarcode_1.14.0.tar.gz 2025-04-22 18:37 3.1M
CellBench_1.24.0.tar.gz 2025-04-22 18:37 3.0M
CellMapper_1.34.0.tar.gz 2025-04-22 18:37 205K
CellMixS_1.24.0.tar.gz 2025-04-22 18:37 3.9M
CellNOptR_1.54.0.tar.gz 2025-04-22 18:37 3.5M
CellScore_1.27.0.tar.gz 2025-04-22 18:37 4.2M
CellTrails_1.26.0.tar.gz 2025-04-22 18:37 2.6M
CelliD_1.16.0.tar.gz 2025-04-22 18:37 2.5M
Cepo_1.14.0.tar.gz 2025-04-22 18:37 3.2M
CexoR_1.46.0.tar.gz 2025-04-22 18:37 1.7M
ChAMP_2.38.0.tar.gz 2025-04-22 18:37 8.0M
ChIPComp_1.38.0.tar.gz 2025-04-22 18:37 597K
ChIPQC_1.44.0.tar.gz 2025-04-22 18:37 1.5M
ChIPXpress_1.52.0.tar.gz 2025-04-22 18:37 448K
ChIPanalyser_1.30.0.tar.gz 2025-04-22 18:37 1.0M
ChIPexoQual_1.32.0.tar.gz 2025-04-22 18:37 2.3M
ChIPpeakAnno_3.42.0.tar.gz 2025-04-22 18:37 21M
ChIPseeker_1.44.0.tar.gz 2025-04-22 18:37 7.2M
ChIPseqR_1.61.0.tar.gz 2025-04-22 18:37 730K
ChIPsim_1.62.0.tar.gz 2025-04-22 18:37 647K
ChemmineOB_1.46.0.tar.gz 2025-04-22 18:37 1.3M
ChemmineR_3.60.0.tar.gz 2025-04-22 18:37 2.1M
Chicago_1.36.0.tar.gz 2025-04-22 18:37 1.2M
ChromHeatMap_1.62.0.tar.gz 2025-04-22 18:37 318K
ChromSCape_1.17.0.tar.gz 2025-04-22 18:37 5.3M
CircSeqAlignTk_1.10.0.tar.gz 2025-04-22 18:37 1.8M
CiteFuse_1.20.0.tar.gz 2025-04-22 18:37 3.3M
ClassifyR_3.12.0.tar.gz 2025-04-22 18:37 2.4M
CleanUpRNAseq_1.2.0.tar.gz 2025-04-22 18:37 2.4M
Clomial_1.44.0.tar.gz 2025-04-22 18:37 1.5M
CluMSID_1.24.0.tar.gz 2025-04-22 18:37 4.5M
ClustAll_1.4.0.tar.gz 2025-04-22 18:37 2.9M
ClustIRR_1.6.0.tar.gz 2025-04-22 18:37 4.1M
ClusterFoldSimilarity_1.4.0.tar.gz 2025-04-22 18:37 1.6M
ClusterJudge_1.30.0.tar.gz 2025-04-22 18:37 941K
ClusterSignificance_1.36.0.tar.gz 2025-04-22 18:37 1.8M
CoCiteStats_1.80.0.tar.gz 2025-04-22 18:37 5.3K
CoGAPS_3.28.0.tar.gz 2025-04-22 18:37 20M
CoSIA_1.8.0.tar.gz 2025-04-22 18:37 1.2M
Cogito_1.14.0.tar.gz 2025-04-22 18:37 869K
ComPrAn_1.16.0.tar.gz 2025-04-22 18:37 3.3M
ComplexHeatmap_2.24.0.tar.gz 2025-04-22 18:37 1.4M
CompoundDb_1.12.0.tar.gz 2025-04-22 18:37 1.3M
ConsensusClusterPlus_1.72.0.tar.gz 2025-04-22 18:37 408K
CopyNumberPlots_1.23.0.tar.gz 2025-04-22 18:37 1.8M
CoreGx_2.12.0.tar.gz 2025-04-22 18:37 1.4M
Cormotif_1.54.0.tar.gz 2025-04-22 18:37 375K
CoverageView_1.46.0.tar.gz 2025-04-22 18:37 2.6M
CrispRVariants_1.36.0.tar.gz 2025-04-22 18:37 3.6M
CuratedAtlasQueryR_1.6.0.tar.gz 2025-04-22 18:37 1.0M
CytoDx_1.28.0.tar.gz 2025-04-22 18:37 661K
CytoGLMM_1.16.0.tar.gz 2025-04-22 18:37 305K
CytoMDS_1.4.0.tar.gz 2025-04-22 18:37 5.3M
CytoML_2.20.0.tar.gz 2025-04-22 18:37 8.1M
CytoPipelineGUI_1.6.0.tar.gz 2025-04-22 18:37 1.5M
CytoPipeline_1.8.0.tar.gz 2025-04-22 18:37 3.2M
DAMEfinder_1.20.0.tar.gz 2025-04-22 18:37 4.7M
DAPAR_1.40.0.tar.gz 2025-04-22 18:37 150K
DART_1.56.0.tar.gz 2025-04-22 18:37 2.0M
DCATS_1.6.0.tar.gz 2025-04-22 18:37 2.8M
DECIPHER_3.4.0.tar.gz 2025-04-22 18:37 18M
DEFormats_1.36.0.tar.gz 2025-04-22 18:37 226K
DEGraph_1.60.0.tar.gz 2025-04-22 18:37 1.5M
DEGreport_1.44.0.tar.gz 2025-04-22 18:37 20M
DEGseq_1.62.0.tar.gz 2025-04-22 18:37 2.0M
DELocal_1.8.0.tar.gz 2025-04-22 18:37 2.3M
DEP_1.30.0.tar.gz 2025-04-22 18:37 3.4M
DEScan2_1.28.0.tar.gz 2025-04-22 18:37 2.5M
DESeq2_1.48.0.tar.gz 2025-04-22 18:37 2.6M
DESpace_2.0.0.tar.gz 2025-04-22 18:37 6.9M
DEWSeq_1.22.0.tar.gz 2025-04-22 18:37 3.3M
DEXSeq_1.54.0.tar.gz 2025-04-22 18:37 1.6M
DEqMS_1.26.0.tar.gz 2025-04-22 18:37 2.4M
DEsingle_1.28.0.tar.gz 2025-04-22 18:37 380K
DEsubs_1.34.0.tar.gz 2025-04-22 18:37 4.0M
DExMA_1.16.0.tar.gz 2025-04-22 18:37 315K
DFP_1.66.0.tar.gz 2025-04-22 18:37 496K
DFplyr_1.2.0.tar.gz 2025-04-22 18:37 393K
DMCFB_1.22.0.tar.gz 2025-04-22 18:37 1.1M
DMCHMM_1.30.0.tar.gz 2025-04-22 18:37 744K
DMRScan_1.30.0.tar.gz 2025-04-22 18:37 3.3M
DMRcaller_1.40.0.tar.gz 2025-04-22 18:37 1.6M
DMRcate_3.4.0.tar.gz 2025-04-22 18:37 819K
DNABarcodeCompatibility_1.24.0.tar.gz 2025-04-22 18:37 260K
DNABarcodes_1.38.0.tar.gz 2025-04-22 18:37 348K
DNAcopy_1.82.0.tar.gz 2025-04-22 18:37 404K
DNAcycP2_1.0.0.tar.gz 2025-04-22 18:37 2.3M
DNAfusion_1.10.0.tar.gz 2025-04-22 18:37 6.3M
DNAshapeR_1.36.0.tar.gz 2025-04-22 18:37 1.1M
DOSE_4.2.0.tar.gz 2025-04-22 18:37 5.5M
DRIMSeq_1.36.0.tar.gz 2025-04-22 18:37 481K
DSS_2.56.0.tar.gz 2025-04-22 18:37 2.0M
DTA_2.54.0.tar.gz 2025-04-22 18:37 11M
DaMiRseq_2.20.0.tar.gz 2025-04-22 18:37 4.2M
Damsel_1.4.0.tar.gz 2025-04-22 18:37 3.3M
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