bcellViper
This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see bcellViper.
Human B-cell transcriptional interactome and normal human B-cell expression data
Bioconductor version: 3.19
This package provides a human B-cell context-specific transcriptional regulatory network and a human normal B-cells dataset for the examples in package viper.
Author: Mariano Javier Alvarez
Maintainer: Mariano Javier Alvarez <malvarez at c2b2.columbia.edu>
citation("bcellViper")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("bcellViper")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("bcellViper")| Using bcellViper | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | CancerData, ExperimentData, Genome, Homo_sapiens_Data |
| Version | 1.40.0 |
| License | GPL (>=2) |
| Depends | R (>= 2.14.0), Biobase, methods |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | dorothea |
| Suggests Me | GenomicSuperSignature, pageRank, viper |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | bcellViper_1.40.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/bcellViper |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/bcellViper |
| Package Short Url | https://bioconductor.org/packages/bcellViper/ |
| Package Downloads Report | Download Stats |