reactome.db
This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see reactome.db.
A set of annotation maps for reactome
Bioconductor version: 3.19
A set of annotation maps for reactome assembled using data from reactome. This package has been created by a third-party developer, and is not affiliated with the Reactome team.
Author: Willem Ligtenberg
Maintainer: Willem Ligtenberg <willem at 42analytics.eu>
Citation (from within R, enter
citation("reactome.db")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("reactome.db")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual | |
| NEWS | Text |
Details
| biocViews | AnnotationData, FunctionalAnnotation |
| Version | 1.88.0 |
| License | CC BY 4.0 |
| Depends | R (>= 2.7.0), methods, AnnotationDbi(>= 1.33.0) |
| Imports | methods, AnnotationDbi |
| System Requirements | |
| URL | |
| Bug Reports | https://gitlab.com/42analytics1/public/reactome.db-r-package/-/issues |
See More
| Suggests | RSQLite |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | ReactomePA, SMITE, attract, bioCancer, famat, methylGSA, scTensor, signatureSearch |
| Suggests Me | AnnotationDbi, BioCor, ChIPpeakAnno, FGNet, MLP, PCAN, PhosR, fgsea, gatom, rGREAT, safe, simplifyEnrichment, sparrow, BaseSet, rliger |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | reactome.db_1.88.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Package Short Url | https://bioconductor.org/packages/reactome.db/ |
| Package Downloads Report | Download Stats |