tRNAdbImport
This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see tRNAdbImport.
Importing from tRNAdb and mitotRNAdb as GRanges objects
Bioconductor version: 3.19
tRNAdbImport imports the entries of the tRNAdb and mtRNAdb (http://trna.bioinf.uni-leipzig.de) as GRanges object.
Author: Felix G.M. Ernst [aut, cre] 
Maintainer: Felix G.M. Ernst <felix.gm.ernst at outlook.com>
Citation (from within R, enter
citation("tRNAdbImport")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("tRNAdbImport")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("tRNAdbImport")| tRNAdbImport | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | DataImport, Software, Visualization |
| Version | 1.22.0 |
| In Bioconductor since | BioC 3.8 (R-3.5) (6 years) |
| License | GPL-3 + file LICENSE |
| Depends | R (>= 3.6), GenomicRanges, Modstrings, Structstrings, tRNA |
| Imports | Biostrings, stringr, httr2, xml2, S4Vectors, methods, IRanges, utils |
| System Requirements | |
| URL | |
| Bug Reports | https://github.com/FelixErnst/tRNAdbImport/issues |
See More
| Suggests | BiocGenerics, knitr, rmarkdown, testthat, httptest, BiocStyle, rtracklayer |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | EpiTxDb |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | tRNAdbImport_1.22.0.tar.gz |
| Windows Binary (x86_64) | tRNAdbImport_1.22.0.zip |
| macOS Binary (x86_64) | tRNAdbImport_1.22.0.tgz |
| macOS Binary (arm64) | tRNAdbImport_1.22.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/tRNAdbImport |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/tRNAdbImport |
| Bioc Package Browser | https://code.bioconductor.org/browse/tRNAdbImport/ |
| Package Short Url | https://bioconductor.org/packages/tRNAdbImport/ |
| Package Downloads Report | Download Stats |