ConsensusClusterPlus
This package is for version 3.19 of Bioconductor; for the stable, up-to-date release version, see ConsensusClusterPlus.
ConsensusClusterPlus
Bioconductor version: 3.19
algorithm for determining cluster count and membership by stability evidence in unsupervised analysis
Author: Matt Wilkerson <mdwilkerson at outlook.com>, Peter Waltman <waltman at soe.ucsc.edu>
Maintainer: Matt Wilkerson <mdwilkerson at outlook.com>
citation("ConsensusClusterPlus")):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ConsensusClusterPlus")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ConsensusClusterPlus")| ConsensusClusterPlus Tutorial | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Clustering, Software |
| Version | 1.68.0 |
| In Bioconductor since | BioC 2.6 (R-2.11) (14.5 years) |
| License | GPL version 2 |
| Depends | |
| Imports | Biobase, ALL, graphics, stats, utils, cluster |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | CATALYST, CancerSubtypes, ChromSCape, DEGreport, FlowSOM, PDATK, DeSousa2013, ccml, iSubGen, longmixr, neatmaps, scRNAtools |
| Suggests Me | TCGAbiolinks |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ConsensusClusterPlus_1.68.0.tar.gz |
| Windows Binary (x86_64) | ConsensusClusterPlus_1.68.0.zip |
| macOS Binary (x86_64) | ConsensusClusterPlus_1.68.0.tgz |
| macOS Binary (arm64) | ConsensusClusterPlus_1.68.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/ConsensusClusterPlus |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ConsensusClusterPlus |
| Bioc Package Browser | https://code.bioconductor.org/browse/ConsensusClusterPlus/ |
| Package Short Url | https://bioconductor.org/packages/ConsensusClusterPlus/ |
| Package Downloads Report | Download Stats |