Rcollectl
This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see Rcollectl.
Help use collectl with R in Linux, to measure resource consumption in R processes
Bioconductor version: 3.18
Provide functions to obtain instrumentation data on processes in a unix environment. Parse output of a collectl run. Vizualize aspects of system usage over time, with annotation.
Author: Vincent Carey [aut, cre] 
, Yubo Cheng [aut]
Maintainer: Vincent Carey <stvjc at channing.harvard.edu>
citation("Rcollectl")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Rcollectl")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Rcollectl")| Rcollectl | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Infrastructure, Software |
| Version | 1.2.0 |
| In Bioconductor since | BioC 3.17 (R-4.3) (1 year) |
| License | Artistic-2.0 |
| Depends | |
| Imports | utils, ggplot2, lubridate, processx |
| System Requirements | collectl |
| URL | https://github.com/vjcitn/Rcollectl |
| Bug Reports | https://support.bioconductor.org/t/Rcollectl |
See More
| Suggests | knitr, BiocStyle, knitcitations, sessioninfo, rmarkdown, testthat, covr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | Rcollectl_1.2.0.tar.gz |
| Windows Binary | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/Rcollectl |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Rcollectl |
| Bioc Package Browser | https://code.bioconductor.org/browse/Rcollectl/ |
| Package Short Url | https://bioconductor.org/packages/Rcollectl/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.18 | Source Archive |