Director

This package is for version 3.18 of Bioconductor; for the stable, up-to-date release version, see Director.

A dynamic visualization tool of multi-level data

Bioconductor version: 3.18

Director is an R package designed to streamline the visualization of molecular effects in regulatory cascades. It utilizes the R package htmltools and a modified Sankey plugin of the JavaScript library D3 to provide a fast and easy, browser-enabled solution to discovering potentially interesting downstream effects of regulatory and/or co-expressed molecules. The diagrams are robust, interactive, and packaged as highly-portable HTML files that eliminate the need for third-party software to view. This enables a straightforward approach for scientists to interpret the data produced, and bioinformatics developers an alternative means to present relevant data.

Author: Katherine Icay [aut, cre]

Maintainer: Katherine Icay <kat.icay at gmail.com>

Citation (from within R, enter citation("Director")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Director")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Director")

Using Director	PDF	R Script
Reference Manual	PDF
NEWS	Text
LICENSE	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Software, Visualization
Version	1.28.0
In Bioconductor since	BioC 3.4 (R-3.3) (7.5 years)
License	GPL-3 + file LICENSE
Depends	R (>= 4.0)
Imports	htmltools, utils, grDevices
System Requirements
URL	https://github.com/kzouchka/Director
Bug Reports	https://github.com/kzouchka/Director/issues

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Linking To
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Depends On Me
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Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Director_1.28.0.tar.gz
Windows Binary	Director_1.28.0.zip (64-bit only)
macOS Binary (x86_64)	Director_1.28.0.tgz
macOS Binary (arm64)	Director_1.28.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Director
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Director
Bioc Package Browser	https://code.bioconductor.org/browse/Director/
Package Short Url	https://bioconductor.org/packages/Director/
Package Downloads Report	Download Stats